Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme43233g00001 ATGCATACAAAGAGTCTAGCAACTCTTAAACATCAATTGCTTCGTAACAGACTCGTGATATCTGCTCGGGAAAGTATCAGTAAGAATGCTAGTTTAGGACAGTTATATGGTAATATGCAAGAAGCATATCATCAAATGCAGACACCTCTTATTTACCAAGACCCTTCTGCTCGAGCACAAGGACTAAAAGAATTAAAAGAAACAACCATTCAAGCAGCTACAAGTATGGGAAACGTGGACGCACCGGTCGATGAGACTATATTTGATGTCGACAAAGAAATAGATGACTTGCTTCCTGTCGAGGTAAAGGAACAACGTGTCAGTAACTTGCTTCAATCAGTAATGGTTGGAGGATGTCTTGCAGCCATGCCTATTCTCAAGAAAATCCCAACTTCAGTACTTTGGGGTTACTTTGCTTTCATGGCAATTGAAAGTTTACCTGGAAACCAGTTTTGGGAAAGGATCTTGTTACTCTTCACTGCACCAAGCAGACGATACAAGGTGCTTGAAGATTACCATGCTAYGTTCGTTGAAACAGTTCCGTTTAAGACAATAGCAACATTCACAATTTTCCAAACCATTTATCTACTTATATGTTTTGGACTAACTTGGGTACCTATTGCTGGAGTCATGTTTCCTTTGATGATCATGCTCTTAGTTCCATTA 666 0.3949 MHTKSLATLKHQLLRNRLVISARESISKNASLGQLYGNMQEAYHQMQTPLIYQDPSARAQGLKELKETTIQAATSMGNVDAPVDETIFDVDKEIDDLLPVEVKEQRVSNLLQSVMVGGCLAAMPILKKIPTSVLWGYFAFMAIESLPGNQFWERILLLFTAPSRRYKVLEDYHAXFVETVPFKTIATFTIFQTIYLLICFGLTWVPIAGVMFPLMIMLLVPL 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme43233g00001 222 PANTHER ANION EXCHANGE PROTEIN 1 221 IPR003020 GO:0005452|GO:0006820|GO:0016020
Trme43233g00001 222 Pfam HCO3- transporter family 100 190 IPR011531 GO:0006820|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme43233g00001 Trme-Chr43233 1 963 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme43233g00001 1 222 Antiporters AT2G47160 84.234 6.58e-134 391
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme43233g00001 K24194 - lja:Lj1g3v4831760.1 419.468