Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme432084g00001 GTTACTGTACCTGCTTATTTCAATGATGCTCAGCGAAAAGCTACAAAAGATGCGGGTGCTATTGCTGGACTAAATGTTATGCGAATAATCAACGAGCCTACTGCTGCTGCTCTTGCATATGGCCATGAGAGAATAAATAATGTTGGAAAACGGAATGTGTTTATCTTTGATCTTGGTGGTGGCACTTTTGATGTGTCTCTTCTTACACTTAAGGACAACAACTTTGAAGTAAAGGCCACATCTGGAGATACGCATCTTGGAGGAGAGGACTTTGATAATAGAATGGTGAACCACT 295 0.4102 VTVPAYFNDAQRKATKDAGAIAGLNVMRIINEPTAAALAYGHERINNVGKRNVFIFDLGGGTFDVSLLTLKDNNFEVKATSGDTHLGGEDFDNRMVNH 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme432084g00001 98 Gene3D Actin; Chain A, domain 4 87 98 - -
Trme432084g00001 98 SUPERFAMILY Actin-like ATPase domain 2 98 IPR043129 -
Trme432084g00001 98 ProSitePatterns Heat shock hsp70 proteins family signature 2. 55 68 IPR018181 -
Trme432084g00001 98 Gene3D - 46 86 - -
Trme432084g00001 98 Gene3D - 1 44 - -
Trme432084g00001 98 FunFam Endoplasmic reticulum chaperone BiP 1 56 - -
Trme432084g00001 98 Pfam Hsp70 protein 1 98 IPR013126 GO:0005524|GO:0140662
Trme432084g00001 98 PANTHER HEAT SHOCK PROTEIN 70KDA 1 98 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme432084g00001 Trme-Chr432084 3 297 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme432084g00001 1 98 Calmodulin-binding Proteins AT3G09440 79.798 1.66e-50 166