Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme43207g00001 GCCTGTCATTTGGCTAAACAAGCTTTCGATGAGGCAATTGCGGATTTAGATACCTTGAGTGAAGAGTCATACAAGGACAGTACTTTGATCATGCAATTGTTGAGAGACAACCTTACACTTTGGACCTCCGATTTACCTGAGGATGGAGGTAAGATGATGATTGAGATTTAA 171 0.4094 ACHLAKQAFDEAIADLDTLSEESYKDSTLIMQLLRDNLTLWTSDLPEDGGKMMIEI 56
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme43207g00001 56 Pfam 14-3-3 protein 1 42 IPR023410 -
Trme43207g00001 56 ProSitePatterns 14-3-3 proteins signature 2. 24 43 IPR023409 -
Trme43207g00001 56 Gene3D - 1 54 IPR036815 -
Trme43207g00001 56 PANTHER 14-3-3 PROTEIN 1 44 IPR000308 -
Trme43207g00001 56 SUPERFAMILY 14-3-3 protein 1 49 IPR036815 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme43207g00001 Trme-Chr43207 840 1010 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme43207g00001 1 51 14-3-3 family AT1G26480 96.078 7.41e-31 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme43207g00001 - K06630 mnt:21390084 104.375