Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme43193g00001 ATGGGTTTTCGCTTACCTGGTATCATCAGATCAAGGGCTTCATCTTCAAATGGTGTGGATGTGCCAAAGGGATATCTAGCAGTATATGTTGGAGATGAAATGAAACGGTTTGTAATCCCAATATCATACTTGAATCAACCATCATTTCAAGGGTTGTTGAACCAAGCTGAGGAACAATTTGAATATGATCATCCAACGGGTGGTCTCACTATTCCATGTAGAGAAGGCGTGTTCTTAGAGATAACTTCTCGCTTGAGAAG 260 0.4077 MGFRLPGIIRSRASSSNGVDVPKGYLAVYVGDEMKRFVIPISYLNQPSFQGLLNQAEEQFEYDHPTGGLTIPCREGVFLEITSRLR 86
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme43193g00001 86 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 14 85 IPR003676 GO:0009733
Trme43193g00001 86 Pfam Auxin responsive protein 13 84 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme43193g00001 Trme-Chr43193 53 312 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme43193g00001 20 78 Calmodulin-binding Proteins AT3G43120 55.932 1.49e-18 73.2