Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme4316g00001 ATGGCAAAACATGATCAAAACCAGGAAAAATACCAACAACACAAGCAATTGGAATTCAAATGCGACAACGAGGCTGAATCTCAAATTGAGGCGCCATTGCCTCTCACCGTCACTTCCAGGGCTTTGTATATGTTGGGAGATATAACTGCAGGGCCTGCGTTTAGGTTCACGCAATGGCTCCAATTGGTTCGTAGACGCACTTCCAATTATCGCTCTTCTGGCTTTCCTCGTCGTCCTTCAACCACCATGCTTTCTAATTCTAGCGTCAAAGAATCAACTGAGGATCCCAAATGTGATATACAGCCTGATCAAACAGGAATTAGCTTATGGGAGAGACTTGGGAAAGCTGCAATGTTGGATATTGAATCAGGCTCCTTTTCTTGGGATGAGCTCTCTTCACTGCACCATACTGAACACAGCAGTAGTAATGAACATTCTGAAGATGAAATGAACAAAGCTCTTGAGGTAACCGTGAATTCTGGAGGTGTTGTCTTCTTTGCGTTTTTCAATTGTCAAGGGAGTGATGATGCTTATCCAAATGAGGCGGCAGCTGTTATAAAAATAGCATCATCAAGAATGGCAACGCAATCTGAACGCCTCGGATATGAATTGGCTAAGTGGCTGGGAATCCAAACTCCGCAGGCTAGAGTCATTCACAATACCAGTTCAGAATGGCAACAAATAAAGGAAGCTACAGAAAAAGCTAGAGAAGCGGCGGCAAGTTCTGGGAGTGATGAAGTTGGTGAAGTGACAT 754 0.4403 MAKHDQNQEKYQQHKQLEFKCDNEAESQIEAPLPLTVTSRALYMLGDITAGPAFRFTQWLQLVRRRTSNYRSSGFPRRPSTTMLSNSSVKESTEDPKCDIQPDQTGISLWERLGKAAMLDIESGSFSWDELSSLHHTEHSSSNEHSEDEMNKALEVTVNSGGVVFFAFFNCQGSDDAYPNEAAAVIKIASSRMATQSERLGYELAKWLGIQTPQARVIHNTSSEWQQIKEATEKAREAAASSGSDEVGEVT 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme4316g00001 251 SUPERFAMILY Protein kinase-like (PK-like) 58 234 IPR011009 -
Trme4316g00001 251 Pfam Actin-fragmin kinase, catalytic 107 239 IPR015275 -
Trme4316g00001 251 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE PHS1 10 251 IPR035010 GO:0004721|GO:0009737|GO:0043622
Trme4316g00001 251 MobiDBLite consensus disorder prediction 229 251 - -
Trme4316g00001 251 MobiDBLite consensus disorder prediction 70 91 - -
Trme4316g00001 251 MobiDBLite consensus disorder prediction 70 101 - -
Trme4316g00001 251 Gene3D - 113 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme4316g00001 Trme-Chr4316 8 2081 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme4316g00001 30 251 Protein tyrosine phosphatase (PTP) family AT5G23720 65.315 3.34e-92 289
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme4316g00001 K14165 - gmx:100791993 347.436