Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme43066g00001 ATGCACCACGACCCTGAATTATGGGGAGAAGATGTGAATGAGTTCAAACCAGAGAGGTTCATGGATGATGTGAATGGTGGATGCAAACACAAGATGGGGTATTTACCTTTTGGATTTGGAGGGAGGATGTGTGTGGGAAGAAACTTGACATTCATGGAGTATAAGATAGTATTAACAAGACTTCTCTCTAACTTCACTTTTAAGGTTTCACCAAATTATCATCATTCACCAGCCATTATGCTCTCCCTAAGGCCCACTCATGGACTTCAACTCATTGTTCAACCCCTTAATTAG 294 0.4116 MHHDPELWGEDVNEFKPERFMDDVNGGCKHKMGYLPFGFGGRMCVGRNLTFMEYKIVLTRLLSNFTFKVSPNYHHSPAIMLSLRPTHGLQLIVQPLN 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme43066g00001 97 Pfam Cytochrome P450 1 88 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme43066g00001 97 Gene3D Cytochrome P450 1 96 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme43066g00001 97 SUPERFAMILY Cytochrome P450 1 95 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme43066g00001 97 PANTHER CYTOCHROME P450 FAMILY MEMBER 1 88 - -
Trme43066g00001 97 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 37 46 IPR017972 GO:0005506|GO:0016705
Trme43066g00001 97 PRINTS E-class P450 group I signature 44 67 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme43066g00001 97 PRINTS E-class P450 group I signature 34 44 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme43066g00001 Trme-Chr43066 8 301 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme43066g00001 1 96 Cytochrome P450 AT5G52400 71.875 5.59e-46 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme43066g00001 - - ccaj:109794946 186.808