Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme430575g00001 ATGTGGACCCTATCTTTGCCCGAGGGTGCGGATCGCGACCATGTGTATTGTAATCCAACGGTTTCAGATGCAGTATACGGTGAGAAGATCGGACAGCTGCTGAAGACTTTTATTAATGGCTACGCTGGGGATCCATTGGTGGATAAGCAAAAGGAGGTAGTGAAGCTTTTGGAAGCACATGGGGTCCACGTGGAACCCTATTTTTGTGAGGATGGGTATCATGCTGTGG 229 0.4891 MWTLSLPEGADRDHVYCNPTVSDAVYGEKIGQLLKTFINGYAGDPLVDKQKEVVKLLEAHGVHVEPYFCEDGYHAV 76
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme430575g00001 76 Gene3D alpha/beta hydrolase 1 76 IPR029058 -
Trme430575g00001 76 Pfam alpha/beta hydrolase fold 1 75 IPR013094 GO:0016787
Trme430575g00001 76 SUPERFAMILY alpha/beta-Hydrolases 1 76 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme430575g00001 Trme-Chr430575 1 229 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme430575g00001 2 65 Carbohydrate Esterase AT5G16080 40.625 6.23e-08 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme430575g00001 - - pvu:PHAVU_010G086500g 122.094