Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme43044g00001 GGTACTGAGTGTCCTGGTGCTGATGTAAGCCCTCATGGGGAAAATAAAAGGTCAAAACGTTCTTTTCCGCCAAAGGCATTCACAGTGGAGATAAGTTTTGCTGCCAAAATACCCTTGCAATCCATTGCTCTTTCCCTTAAAGGGATTGAGTCATATGCTAATTCTCAGGATGCATTGAGGGTGCTTGATACCATACTGAGGCAGCGAGCAGCTAACAGAGGGTGTCTCTTGGTAAGGCAATCTTTTTTTCATGATGACTCGAAGAATTTCATTGATGTTGGAGGTGGAGTAACAGGAGTTCGGGGTTTTCATTCCAGTTTTCGTCTTACACAGGGAGGATTGTCTCTTAATATGGATGTGTCCACAACGATGATCGTAAAACCTGGACCTGTAATTGATTTTCTCCTAACCAACCAGAGTGTGAGGGAACCTCGTTATATTGACTGGGCAAAGGCCAAGAGAATGCTTAAAAATTTAAGAGTTCGTGCTACTCATCGTAATCAAGAATTCAAAATTTCTGGCTTGAGTGAGAAACCCTGCATTCAACAACTGTAA 555 0.4252 GTECPGADVSPHGENKRSKRSFPPKAFTVEISFAAKIPLQSIALSLKGIESYANSQDALRVLDTILRQRAANRGCLLVRQSFFHDDSKNFIDVGGGVTGVRGFHSSFRLTQGGLSLNMDVSTTMIVKPGPVIDFLLTNQSVREPRYIDWAKAKRMLKNLRVRATHRNQEFKISGLSEKPCIQQL 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme43044g00001 184 MobiDBLite consensus disorder prediction 1 21 - -
Trme43044g00001 184 SMART DUF1785_2 76 128 IPR014811 -
Trme43044g00001 184 Pfam Argonaute linker 1 domain 78 126 IPR014811 -
Trme43044g00001 184 SUPERFAMILY PAZ domain 52 176 IPR036085 GO:0005515
Trme43044g00001 184 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 14 183 - -
Trme43044g00001 184 CDD PAZ_argonaute_like 128 183 - -
Trme43044g00001 184 Gene3D paz domain 122 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme43044g00001 Trme-Chr43044 72 923 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme43044g00001 25 176 Eukaryotic Initiation Factors Gene Family AT1G48410 36.250 1.84e-20 86.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme43044g00001 K11593 - gmx:100778875 286.574