Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Trme429531g00001 | ATGTTGGCTGAGATTATCGTCATGTATCCGATTCAACACCGCAAATATCGCGATGGAATTGACAACCTTTTAGTCCTTTTGATTGGTGGAATTCCAATTGCTATGCCAACTGTTTTGTCTGTTACAATGGCTATTGGTTCTCACAAACTTTCTCAGCAAGGTGCTATCACAAAAAGAATGACTGCTATTGAAGAAATGGCTGGTATGGATGTTCTTTGCAGCGACAAAACCGGAACACTTACTCTTAACAAA | 252 | 0.3968 | MLAEIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHKLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNK | 84 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Trme429531g00001 | 84 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 75 | 81 | IPR018303 | - | |
| Trme429531g00001 | 84 | FunFam | Phospholipid-transporting ATPase IC | 70 | 82 | - | - | |
| Trme429531g00001 | 84 | Gene3D | - | 70 | 84 | IPR023214 | - | |
| Trme429531g00001 | 84 | Gene3D | - | 1 | 69 | - | - | |
| Trme429531g00001 | 84 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 5 | 68 | IPR023298 | - | |
| Trme429531g00001 | 84 | PANTHER | CALCIUM-TRANSPORTING ATPASE | 1 | 84 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Trme429531g00001 | Trme-Chr429531 | 1 | 252 | Dispersed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Trme429531g00001 | 1 | 84 | Primary Pumps ATPases | AT2G07560 | 96.429 | 1.56e-50 | 167 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Trme429531g00001 | K01535 | - | gmx:100804422 | 165.622 |