Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Trme429531g00001 ATGTTGGCTGAGATTATCGTCATGTATCCGATTCAACACCGCAAATATCGCGATGGAATTGACAACCTTTTAGTCCTTTTGATTGGTGGAATTCCAATTGCTATGCCAACTGTTTTGTCTGTTACAATGGCTATTGGTTCTCACAAACTTTCTCAGCAAGGTGCTATCACAAAAAGAATGACTGCTATTGAAGAAATGGCTGGTATGGATGTTCTTTGCAGCGACAAAACCGGAACACTTACTCTTAACAAA 252 0.3968 MLAEIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHKLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNK 84
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Trme429531g00001 84 ProSitePatterns E1-E2 ATPases phosphorylation site. 75 81 IPR018303 -
Trme429531g00001 84 FunFam Phospholipid-transporting ATPase IC 70 82 - -
Trme429531g00001 84 Gene3D - 70 84 IPR023214 -
Trme429531g00001 84 Gene3D - 1 69 - -
Trme429531g00001 84 SUPERFAMILY Calcium ATPase, transmembrane domain M 5 68 IPR023298 -
Trme429531g00001 84 PANTHER CALCIUM-TRANSPORTING ATPASE 1 84 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Trme429531g00001 Trme-Chr429531 1 252 Dispersed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme429531g00001 1 84 Primary Pumps ATPases AT2G07560 96.429 1.56e-50 167
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme429531g00001 K01535 - gmx:100804422 165.622