Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme42952g00001 ATGTGTTGCACTTGGTTTCTTCTGCAGTCCTGGAACATCTATAGCAACAAGTGCAGTATTGTTGGGTCTAGTACTTCTTGGAAGAGCAGCGTTATCATTTGGTGGGCTGGTCTTATGAGAGGTGCTGTTTCAATGGCCCTCGCGTATAATCAGTTCACTAGGTCGGGGCACACTCAACTGCGTAGCAATGCAATCATGATCACCAGCACCATCACTGTTGTCCTTTTCAGCACAGTGAGTCTCGCATTGGTTGAGAGATGTCATGCAAATATGTTTATAACTGATGACAATCTTCACCTTACAATCCGGTTTTGTAAGGTTGAGTTAGACTCAATCCAAAATTCCAAGATGGTATCAGAGCCTCCTCCAAGATCCGTTGGG 381 0.4488 MCCTWFLLQSWNIYSNKCSIVGSSTSWKSSVIIWWAGLMRGAVSMALAYNQFTRSGHTQLRSNAIMITSTITVVLFSTVSLALVERCHANMFITDDNLHLTIRFCKVELDSIQNSKMVSEPPPRSVG 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme42952g00001 127 PANTHER SODIUM/HYDROGEN EXCHANGER 10 80 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme42952g00001 Trme-Chr42952 1 937 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme42952g00001 26 86 Antiporters AT3G05030 73.770 8.04e-25 96.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme42952g00001 - K14724 cit:102626468 101.293