Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme42934g00001 ATGGTGTCAAGATCTTATTCAAATCTACTAGAGCTAGCCTCTGGTGAGTCTCCAACGTTTGAAAACATGAACAGGAGAATTCCAAGGATTATGACTGTTGCTGGTTTGATATCTGATGTTGATGATGACCCTTTGGAGAGTGTGTGTTCTGACCCATCTTCTTCATCTGTTCAACGAGAAAGGATCATAATAGTAGCAAATCAGCTTCCTATAAAGGCTCAAAGGAAGCAAGATGGTAATAACAAAAATAATTGGTTTTTCAGTTGGGATGAGAATTCACTTCTACTTCAACTCAAAGATGGGTTAGGAGATGATGATATTGATGTTATTTATGTTGGTTGCCTTAAGGAAGATGTTCATCCAAATGAACAAGATGAGGTTTCACAGATACTACTTGAGACCTTTAAATGTGTCCCAACTTTTCTCCCAGGTGATCTTTTTACAAGGTATTATCATGGCTTTTGTAAGCAACAGTTATGGCCACTGTTCCATTACATGTTGCCTCTGTCACCAGACCTTGGTGGTAGGTTCAATAGGTCACTGTGGCAAGCTTATGTATCAGTCAATAAGATATTTGCTGATAGGATTATGGAAGTGATTAACCCTGAAGATGATTATGTTTGGATACATGATTATCATCTCATGGTTTTACCAACTTTCTTGAGAAAAAGGTTTAATAGAGTGAAACTGGGATTTTTTCTCCATAGCCCTTTCCCTTCATCAGAAATTTACAAGACATTGCCTATTAGGGAAGAGCTTTTGAGAGCCCTTTTGAACTCTGATTTGATTGGTTTCCACACTTTTGATTATGCAAGACATTTCCTCTCATGTTGCAGTAGGATGCTTGGTCTTACCTATGAATCCAAAAGAG 871 0.3789 MVSRSYSNLLELASGESPTFENMNRRIPRIMTVAGLISDVDDDPLESVCSDPSSSSVQRERIIIVANQLPIKAQRKQDGNNKNNWFFSWDENSLLLQLKDGLGDDDIDVIYVGCLKEDVHPNEQDEVSQILLETFKCVPTFLPGDLFTRYYHGFCKQQLWPLFHYMLPLSPDLGGRFNRSLWQAYVSVNKIFADRIMEVINPEDDYVWIHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIREELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKR 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme42934g00001 290 Gene3D Glycogen Phosphorylase B; 51 290 - -
Trme42934g00001 290 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 61 289 - -
Trme42934g00001 290 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 54 290 - -
Trme42934g00001 290 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 29 290 IPR001830 GO:0003824|GO:0005992
Trme42934g00001 290 Pfam Glycosyltransferase family 20 61 289 IPR001830 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme42934g00001 Trme-Chr42934 103 973 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme42934g00001 1 290 Trehalose Biosynthesis Gene Families AT1G68020 80.000 4.17e-172 496
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme42934g00001 K16055 - cave:132176996 529.25