Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme42927g00001 GTTTGTGTATGGACTGCTCTATTGCTATTTCTTTTAGCAGTATTCAATGCTGCCATTATCATAAATAGATTTACAAGGATTGCTGGTGAGCTTTTTGGCATGTTGATAACATTCTTATTCATACAAGAGGCTATCAAGGGAATGGTAACTGAGTTTCAAGTTCCTAAAGAGAGTGATCCAACATTGGATAAGTTCCAATTTCATTGGCTCTATGCAAATGGATTGCTTGGTGTTATATTCACCTTTGGCCTTCTCTATACTTCTCTAAAAAGCAGAAGAGCAAGATCATGGTTATATGGAACAGAATGGTTAAGAAGTTTCATAGCAGATTATGGAGTACCATTCATG 348 0.3621 VCVWTALLLFLLAVFNAAIIINRFTRIAGELFGMLITFLFIQEAIKGMVTEFQVPKESDPTLDKFQFHWLYANGLLGVIFTFGLLYTSLKSRRARSWLYGTEWLRSFIADYGVPFM 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme42927g00001 116 PANTHER ANION EXCHANGE PROTEIN 1 116 IPR003020 GO:0005452|GO:0006820|GO:0016020
Trme42927g00001 116 Pfam HCO3- transporter family 1 53 IPR011531 GO:0006820|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme42927g00001 Trme-Chr42927 16 568 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme42927g00001 1 116 Antiporters AT1G15460 75.000 1.68e-59 190
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme42927g00001 K24194 - gmx:100811184 204.527