Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme42904g00001 AGGCAATGCAGTGAAAAATGTAAAATTAATGGATATGATATACCGCCCAAAAGTAAAGTCATTGTTAATGCATGGTCAATAGCAAGAGATTCAAGATGCTGGATTGAAGGCGAGAAATTTGTTCCAGAAAGGTTCATTGATAGCTCAGTTGATTACAAAGGTGGGGATTTTCAGTTTATACCATTTGGCGCTGGAAGAAGGATTTGTCCTGGCATGCCATTTGGTATTGCTAGCTTGGAAATCTCACTTACAAATTTACTTTACCATTTTAATTGGAAGATGCCTAATGGTGATAATGCTGATGAACTCGATATGACCGATGACTGTTAG 330 0.3758 RQCSEKCKINGYDIPPKSKVIVNAWSIARDSRCWIEGEKFVPERFIDSSVDYKGGDFQFIPFGAGRRICPGMPFGIASLEISLTNLLYHFNWKMPNGDNADELDMTDDC 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme42904g00001 109 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 62 71 IPR017972 GO:0005506|GO:0016705
Trme42904g00001 109 Pfam Cytochrome P450 1 100 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme42904g00001 109 PANTHER OS08G0105600 PROTEIN 1 108 - -
Trme42904g00001 109 SUPERFAMILY Cytochrome P450 1 99 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme42904g00001 109 PRINTS E-class P450 group I signature 59 69 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme42904g00001 109 PRINTS E-class P450 group I signature 69 92 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme42904g00001 109 PRINTS E-class P450 group I signature 23 47 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme42904g00001 109 Gene3D Cytochrome P450 1 107 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme42904g00001 Trme-Chr42904 3 332 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme42904g00001 1 107 Cytochrome P450 AT1G13080 52.336 9.07e-43 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme42904g00001 - - gmx:100819247 170.629