Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme428127g00001 GGCTGTGATGCATCCCTTCTAATTGACCCTACAAACAAAACCGCTTCAGAGAAAAATGATGGCGCGAACGCAAGTGTTAGAGGCTTTGACATAATCGATGAAGTAAAGGAAGCTCTTGAAGCTGCTTGTCCTTCCACGGTATCATGTGCAGATATCATAGCACTTGCAACAAGGGATGCTGTGGCTTTATCAGGAGGACCTAAATAC 207 0.4493 GCDASLLIDPTNKTASEKNDGANASVRGFDIIDEVKEALEAACPSTVSCADIIALATRDAVALSGGPKY 69
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme428127g00001 69 PRINTS Haem peroxidase superfamily signature 47 64 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trme428127g00001 69 PRINTS Haem peroxidase superfamily signature 65 69 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trme428127g00001 69 PANTHER PEROXIDASE 72-RELATED 1 69 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme428127g00001 69 PRINTS Plant peroxidase signature 65 69 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme428127g00001 69 PRINTS Plant peroxidase signature 46 56 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme428127g00001 69 PRINTS Plant peroxidase signature 27 40 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme428127g00001 69 Pfam Peroxidase 1 68 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trme428127g00001 69 SUPERFAMILY Heme-dependent peroxidases 1 69 IPR010255 GO:0004601|GO:0006979|GO:0020037
Trme428127g00001 69 ProSiteProfiles Plant heme peroxidase family profile. 1 69 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trme428127g00001 69 Gene3D - 1 69 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme428127g00001 Trme-Chr428127 1 207 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme428127g00001 1 69 Peroxidase AT3G03670 73.913 3.12e-30 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme428127g00001 K00430 - lja:Lj1g3v4002580.1 114.39