Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme42805g00001 ATGCCTCATGCAAAAATTCAAAATGTATTGAGATTGAGTTATGATAGACTCGATCGAGAAGAGAAGAACATATTTTTATATATTGCATGTCTGTTGAAAGGATATGAAGTTCAACAAATAATAGCTTTGCTTGATGCTTGTGGTTTCTCAACAATTATTGGGTTAAAAGTCCTTAAAGACAAAGCCCTTATAATTGAAGCCAAGGGCGCTGGAAAATCAATGGTTCTGATGCATGACTTGATACAAGAAATGGGCTGGGAGATTGTTCGAGAAGAATGTATTGAAGACCCTGGAAAACGCAGTAGGTTATGGGATCCTAATGATGTTCATCAAGTATTGACAAATAACACGGGAACTAAAGCCGTTAAAAGCATAACTCTGAATGTCTCGAAATTTGATGAGCTGCAGTTAAGTCCTCAAGTCTTCGGTAGGATGCAGCAGTTAAAATTTCTTAAATTTACCCAACATTATGGCGATGAGAAAATCCTGTATCTTCCTCAGGGTCTTGAATCTTTGCCAAATGACCTACTGCTTTTTCAATGGGTTAGTTATCCTTTGAAATCCCTGCCTCAGTCTTTTTGTGCAGAAAATCTTGTTGAGCTAAAGTTGACTTCAAGCCGAGTGGAAAAACTTTGGGATGGAGTCCAGAATATTCAACATTTGAAGAAAATTGACCTCAGTTATTCCAAATATCTGCTAGAGCTCCCTGATTTTTCAAAGGCCTCA 726 0.376 MPHAKIQNVLRLSYDRLDREEKNIFLYIACLLKGYEVQQIIALLDACGFSTIIGLKVLKDKALIIEAKGAGKSMVLMHDLIQEMGWEIVREECIEDPGKRSRLWDPNDVHQVLTNNTGTKAVKSITLNVSKFDELQLSPQVFGRMQQLKFLKFTQHYGDEKILYLPQGLESLPNDLLLFQWVSYPLKSLPQSFCAENLVELKLTSSRVEKLWDGVQNIQHLKKIDLSYSKYLLELPDFSKAS 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme42805g00001 242 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 5 241 IPR044974 GO:0006952
Trme42805g00001 242 Gene3D Ribonuclease Inhibitor 106 241 IPR032675 -
Trme42805g00001 242 Pfam Leucine Rich Repeat 197 216 IPR011713 -
Trme42805g00001 242 SUPERFAMILY L domain-like 77 240 - -
Trme42805g00001 242 SUPERFAMILY "Winged helix" DNA-binding domain 5 113 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme42805g00001 Trme-Chr42805 1 921 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme42805g00001 6 242 WRKY Transcription Factor Family AT4G12020 41.129 7.00e-48 167