Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme427771g00001 ATGGATGAACTAATCAAGATGGCTGAACCAGATTCCCATCTCTGGATCACGAGTCCAGACAACGAGAACGAAGTGTTTAACCACGACGAGTATGAACGGACGCGTTCTTGTTTTAATACTCCGAAACCAAATGGTTTTGTAACTGAAGCTACAAGAGAGACTGTGCTGTTATGCACCAACACTGCTGCACTGATCGAAACATTTCTTGATGCG 213 0.4413 MDELIKMAEPDSHLWITSPDNENEVFNHDEYERTRSCFNTPKPNGFVTEATRETVLLCTNTAALIETFLDA 71
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme427771g00001 71 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 1 71 IPR042160 -
Trme427771g00001 71 ProSiteProfiles START domain profile. 1 71 IPR002913 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme427771g00001 Trme-Chr427771 40 252 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme427771g00001 1 71 Homeobox Transcription Factor Family AT4G00730 43.662 3.18e-15 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme427771g00001 K09338 - tpra:123905936 105.145