Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme42703g00001 AGTTATTGTTCCTTCTATGGGAAGAAGGTGGACCCCGAGCCAGGAAGATGTAGGAGGACTGATGGAAAAAAGTGGAGGTGCTCCAAGGAAGCATACCCAGACTCCAAGTACTGTGAGCGCCACATGCACCGTGGCCGCAACCGTTCAAGAAAGCCTGTGGAATCACAAACTATGGCACAGTCGTCATCCACTGTGACATCTCTGACTGTCGCTGGTGGCGGCAGCAGAGCTGGAAACTTCCAGAACCTTCCCACAACAAATGCCTTTGGTAGTCTTCAAAATACTACTGCTTCTGGAACTGACCGTGCCGATTATCATCTTGATACCATTCCCTATGGGATTCCAAGTAAAGAATACAGGTAA 363 0.4904 SYCSFYGKKVDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGRNRSRKPVESQTMAQSSSTVTSLTVAGGGSRAGNFQNLPTTNAFGSLQNTTASGTDRADYHLDTIPYGIPSKEYR 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme42703g00001 120 MobiDBLite consensus disorder prediction 52 102 - -
Trme42703g00001 120 MobiDBLite consensus disorder prediction 41 120 - -
Trme42703g00001 120 Pfam WRC 12 54 IPR014977 -
Trme42703g00001 120 ProSiteProfiles WRC domain profile. 11 55 IPR014977 -
Trme42703g00001 120 PANTHER GROWTH-REGULATING FACTOR 5 3 87 IPR031137 GO:0005634|GO:0006351|GO:0032502
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme42703g00001 Trme-Chr42703 629 991 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme42703g00001 2 77 GRF Transcription Factor Family AT4G37740 58.333 1.86e-26 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme42703g00001 - - gmx:100787226 214.157