Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme42620g00001 GTGACTTGTGGAATCCGAAGTATTAGAATTAGAGTTAAAAGTAGTAGTAAAGTTAAAGATTGGGTCGCTGCAATTAATGATGCTGGACTCAGGCCTCCCGAAGGCTGGTGTCATCCTCACCGCTATGGTTCTTTTGCTCCTCCAAGAGGCTTAATTGAAGATGACAGCCAAGCCCAGTGGTTTGTAGATGGGCAAGCAGCATTTGAGGTCATTGCTTCTGCAATTGAGGATGCCAAATCTGAGATATTTATCTGTGGGTGGTGGCTGTGCCCAGAACTGTATCTACGGCGACCTTTCCAGGCTCATGCTTCATCAAGGCTTGATAATCTGTTGGAAGCAAAAGCTAAGGAAGGGGTTCAG 360 0.4611 VTCGIRSIRIRVKSSSKVKDWVAAINDAGLRPPEGWCHPHRYGSFAPPRGLIEDDSQAQWFVDGQAAFEVIASAIEDAKSEIFICGWWLCPELYLRRPFQAHASSRLDNLLEAKAKEGVQ 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme42620g00001 120 PANTHER PHOSPHOLIPASE D 6 120 IPR015679 -
Trme42620g00001 120 SUPERFAMILY Phospholipase D/nuclease 14 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme42620g00001 Trme-Chr42620 78 554 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme42620g00001 1 120 Phospholipase D Gene Family (Wang group) AT3G16785 80.833 2.26e-60 197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme42620g00001 K01115 - gmx:100780514 228.409