Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme42560g00001 ATGTTTTCTTGGTTAACAAGATTAGTTTCATCGTGCTTGAGACCAGTGAGACGGTATGCACGTATGAACAAAGATATTGAAAATGATTTTGATGTATCTTCAACATCAGAAGATGCTCTTGTTTGGTTTAAAGACCTTGAGAAACACTCATGTGGTGAATTCTCTTTTGCTGTTGTTCAAGCTAATGAAGTTATTGAAGATCATAGTCAAGTTGAAACTGGTTCTGATTCTGTCTTTGTTGGTGTTTATGATGGACATGGTGGTCCTGATGCTTCTCGCTTTGTTAATGATCATCTCTTTAATCATCTCATCA 313 0.361 MFSWLTRLVSSCLRPVRRYARMNKDIENDFDVSSTSEDALVWFKDLEKHSCGEFSFAVVQANEVIEDHSQVETGSDSVFVGVYDGHGGPDASRFVNDHLFNHLI 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme42560g00001 104 ProSitePatterns PPM-type phosphatase domain signature. 79 87 IPR000222 GO:0043169
Trme42560g00001 104 SUPERFAMILY PP2C-like 58 103 IPR036457 -
Trme42560g00001 104 Gene3D - 17 104 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme42560g00001 Trme-Chr42560 45 357 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme42560g00001 1 104 PP2C-type Phosphatase Gene Family AT5G06750 63.551 1.11e-41 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme42560g00001 K01102 - qsa:O6P43_005836 172.94