Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme425598g00001 ATGGCAATTGCCCTTGCTAATGGAGGGGGGAAAGCCCCTGATTGGCAAGATTTTGTGGGTATTATCACCTTGCTTATCATCAATTCAACAATTAGTTTTATTGAGGAGAACAATGCTGGAAATGCTGCTGCTTCTCTCATGGCTCGTCTCGCTCCA 156 0.4487 MAIALANGGGKAPDWQDFVGIITLLIINSTISFIEENNAGNAAASLMARLAP 52
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme425598g00001 52 Gene3D - 1 52 - -
Trme425598g00001 52 PANTHER CALCIUM-TRANSPORTING ATPASE 1 52 - -
Trme425598g00001 52 SUPERFAMILY Calcium ATPase, transmembrane domain M 6 52 IPR023298 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme425598g00001 Trme-Chr425598 1 276 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme425598g00001 1 36 Primary Pumps ATPases AT3G42640 88.889 5.44e-17 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme425598g00001 K01535 - dcr:108195991 98.5969