Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme42535g00001 ATGATCTCTGCTGCTAATCGTAATAAAAAAGATCGCGAGGTGTACGAAGGAAACACCGATAAAGCTGCAGACATGAAAGGATTAGTAGCTAGAGTGACACTTAGTTGTCCTCAAATAGGTAAAGATGGTGGAAAGCTTACTTTTGTGCCTGAGTCCCTTGAAGAACTGCTAGACATTGGTGCCAAAATGTTTGATTTCTCACCCACCAAAGTTTTGACCAAAGAAGGAGCTGAAATTGATGATATAGATCTTATAAGAGATGGTGATCACCTTATTATTGCAAATGATTGA 291 0.3883 MISAANRNKKDREVYEGNTDKAADMKGLVARVTLSCPQIGKDGGKLTFVPESLEELLDIGAKMFDFSPTKVLTKEGAEIDDIDLIRDGDHLIIAND 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme42535g00001 96 ProSiteProfiles KHA domain profile. 31 96 IPR021789 -
Trme42535g00001 96 Pfam KHA, dimerisation domain of potassium ion channel 31 93 IPR021789 -
Trme42535g00001 96 PANTHER POTASSIUM CHANNEL AKT1 24 94 IPR045319 GO:0005249|GO:0006813
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme42535g00001 31 96 Ion Channels AT2G25600 60.606 4.88e-22 87.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme42535g00001 K21867 - csav:115707434 107.457