Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme42514g00001 GTGCTTTGCCAGAATGGAACACTGGACCCTAACAAGGTGAAGGGTAAAATAGTATTATGCCTGAGAGGAATAAATGCTAGAGTGGACAAAGGAGAACAAGCTCTTCTAGCTGGTGCTGTAGGAATGGTCCTTGCCAATGATGTGACTACTGGAAATGAAATTTTAGCTGATCCTCATGTTCTTCCTGCTTCTCACATCAATTTCTCTGATGGTGTAGATGTCTTCAAATACATCAACTCAACCAA 245 0.4163 VLCQNGTLDPNKVKGKIVLCLRGINARVDKGEQALLAGAVGMVLANDVTTGNEILADPHVLPASHINFSDGVDVFKYINST 81
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme42514g00001 81 SUPERFAMILY PA domain 8 67 IPR046450 -
Trme42514g00001 81 Pfam PA domain 9 72 IPR003137 -
Trme42514g00001 81 CDD PA_subtilisin_like 2 81 - -
Trme42514g00001 81 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 2 80 IPR045051 -
Trme42514g00001 81 Gene3D - 1 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme42514g00001 Trme-Chr42514 300 544 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme42514g00001 1 81 Subtilisin-like Serine Gene Family AT5G59810 64.198 7.27e-28 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme42514g00001 - - gmx:100794807 145.976