Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme42468g00001 GCTAGAGATGTGAACGAAGTTGTTTTGTGTGTCAAAGATCTGAACTCTCCAAGTTTTCATCCTTCCATGGTTTCTGTTTGGGTCACAGACTCATTTGAGAGGAAGGACACAGAGAGAGATCTTTTGGGCAAACTGCTGATCGATCTTGTAAAATCTCATGGTGGCACCTTAAGTCAAGCCCAGCTCGTTGAAGGGTTTGAATCTGTTTTAAGTACTTTGGAAGATGGGGTTACGGATGCCCCAAAAGCACCGGAGTTTCTTGGCCGCATTTTTGCCAAAGCTATAACAGAGCATGTAGTCTCTTTGGAGGAGATTGGGCGGTTAATACACAATGGCGGAGAAAGCCTCTTACAAATTGGACTTGCAGCTGATGTTCTTGGAAGCACCTTGGAAGTGATACAAACTGAGAAGGGTGATGCTTTTTTGACCGAGATCCAGACAAGCTCCAACTTGCAATTGCAGACTTTCCAGCCACCAGAACCGATTAAACCACGAAAACTAGAAAAATTCATTTAG 516 0.4399 ARDVNEVVLCVKDLNSPSFHPSMVSVWVTDSFERKDTERDLLGKLLIDLVKSHGGTLSQAQLVEGFESVLSTLEDGVTDAPKAPEFLGRIFAKAITEHVVSLEEIGRLIHNGGESLLQIGLAADVLGSTLEVIQTEKGDAFLTEIQTSSNLQLQTFQPPEPIKPRKLEKFI 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme42468g00001 171 SMART ma3_7 3 101 IPR003891 -
Trme42468g00001 171 Pfam MA3 domain 2 99 IPR003891 -
Trme42468g00001 171 SUPERFAMILY ARM repeat 2 166 IPR016024 -
Trme42468g00001 171 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 1 171 IPR045208 GO:0003743
Trme42468g00001 171 Gene3D - 1 171 - -
Trme42468g00001 171 ProSiteProfiles MI domain profile. 1 110 IPR003891 -
Trme42468g00001 171 FunFam Eukaryotic translation initiation factor 4G 1 170 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme42468g00001 1 170 Eukaryotic Initiation Factors Gene Family AT3G60240 61.850 5.27e-68 222
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme42468g00001 K03260 - gmx:100796636 273.478