Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme42433g00001 ATGGAATCCAATAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAAATATGATGATGATGACGATGATGATATTGAAATAGTTGAGTCATTACAATTCAATTTTGACACAATACGAGTTGCTACAAGTAACTTTTCCGAAGCTAATAAACTAGGACATGGCGGATTTGGAGTTGTTTATCGGGGTAAACTCTCTGATGGACAGGCGATAGCGGTGAAGAGATTGTCAAGAGATTCTGGACAGGGAGATATTGAATTTAAGAATGAAGTGCTTTTACTAGTTAAACTTCAACATCGGAATTTGGTCAGATTACTTGGTTTTTGTCTAGAAGGAAGAGAAAGACTACTTGTCTATGAATTTGTTCTCAATAAAAGCCTTGATTACTTTATATTTGATCCAATAAAGAAAGCCCAACTAAATTGGGAAAGGCGCTACAAAATCATTGGAG 460 0.35 MESNKEEEEEEEEEEEEEEKYDDDDDDDIEIVESLQFNFDTIRVATSNFSEANKLGHGGFGVVYRGKLSDGQAIAVKRLSRDSGQGDIEFKNEVLLLVKLQHRNLVRLLGFCLEGRERLLVYEFVLNKSLDYFIFDPIKKAQLNWERRYKIIG 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme42433g00001 153 Coils Coil 1 27 - -
Trme42433g00001 153 Pfam Protein tyrosine and serine/threonine kinase 52 137 IPR001245 GO:0004672|GO:0006468
Trme42433g00001 153 SUPERFAMILY Protein kinase-like (PK-like) 34 152 IPR011009 -
Trme42433g00001 153 MobiDBLite consensus disorder prediction 1 27 - -
Trme42433g00001 153 ProSitePatterns Protein kinases ATP-binding region signature. 55 77 IPR017441 GO:0005524
Trme42433g00001 153 Gene3D Phosphorylase Kinase; domain 1 5 124 - -
Trme42433g00001 153 FunFam Cysteine-rich receptor-like protein kinase 17 7 124 - -
Trme42433g00001 153 ProSiteProfiles Protein kinase domain profile. 49 153 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme42433g00001 153 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 15 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme42433g00001 Trme-Chr42433 59 793 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme42433g00001 19 153 Receptor kinase-like Gene Family AT4G23190 62.222 2.01e-57 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trme42433g00001 PK_Tyr_Ser-Thr 4e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme42433g00001 - - lang:109335396 221.476