Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme42397g00001 ATGGATAAAGACATTCACGGACCCTCTGGTTATCAACAGGGTTCAAGTTGGGCAATGGAAGTAGGAGGCCATCTGAAGGTTCATTCGATATTAGTAGAAAGTCATGGTAAGAATGGGCAGATGCTTGTTGAGATAGCAGAAGCCATAAGAAGCTTGGGATTGACGATTTTGAACGGTGCAACTGAACCTCGTGGTGAGAAGACATGCATATGTTTTATTGTTGAG 225 0.4311 MDKDIHGPSGYQQGSSWAMEVGGHLKVHSILVESHGKNGQMLVEIAEAIRSLGLTILNGATEPRGEKTCICFIVE 75
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme42397g00001 75 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 9 75 IPR043561 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme42397g00001 Trme-Chr42397 214 596 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme42397g00001 13 75 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 54.054 1.13e-16 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme42397g00001 - - cam:101504684 124.79