Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme42318g00001 ATGCCAAGTGTGGCTGTAAAACTCTACAGCGTATTCTTCAAGTTCCTCTTGAAGCACCGTTTACAAAACCGTATTCAATCTCAACCCGATTTAAATAACAACAACTCTAACTCGTTTGGTATCACTTCACGACCCGAAGAAACCGTCGCAAATTCTAACCCTTCTTTTACCGACGGTGTCGCTACCAAAGACATTCACATCGATCCTTTCACTTCTCTTTCAATTCGAATTTTCCTTCCTCAATCTGCACTTTCACCACCCGAACCTAATTCCAAACCTAAAAAGCAAGATCCCGAACCTGGATCTGCTACTTCACGGCGGAATAGTTATGGTCCACCGTATAAGGANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNATTATATAGAGGTTATTCGCCGCCGGTGTTGGATAATCGACGGAGAAAATTGCCGGTGATGTTGCAGTTTCATGGTGGTGGTTGGGTTAGTGGGAGTAATGATTCTGTTGCGAATGATTTGTTTTGTAGACGGATTTCGAAGCTTTGTGATGTGATTGTTGTTGCTGTTGGGTATAGGTTGGCGCCCGAGAGTCGGTATCCNNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNTGGTGGTGGTGGTGGTGGTGAGTTTAATAAATCAGATGGTCATAGACATATTGTTGATTCGTTCGGAGCTTCAGTTGTTGAGCCTTGGTTGGCTAGTCATGGAGATCCAGCAAGGTTTTCACTATTTCATCGTTAA 891 0.3356 MPSVAVKLYSVFFKFLLKHRLQNRIQSQPDLNNNNSNSFGITSRPEETVANSNPSFTDGVATKDIHIDPFTSLSIRIFLPQSALSPPEPNSKPKKQDPEPGSATSRRNSYGPPYKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLYRGYSPPVLDNRRRKLPVMLQFHGGGWVSGSNDSVANDLFCRRISKLCDVIVVAVGYRLAPESRYPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGGGGGEFNKSDGHRHIVDSFGASVVEPWLASHGDPARFSLFHR 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme42318g00001 296 MobiDBLite consensus disorder prediction 82 121 - -
Trme42318g00001 296 MobiDBLite consensus disorder prediction 27 59 - -
Trme42318g00001 296 Coils Coil 114 115 - -
Trme42318g00001 296 MobiDBLite consensus disorder prediction 27 61 - -
Trme42318g00001 296 PANTHER ARYLACETAMIDE DEACETYLASE 44 215 - -
Trme42318g00001 296 Pfam alpha/beta hydrolase fold 167 215 IPR013094 GO:0016787
Trme42318g00001 296 Gene3D alpha/beta hydrolase 19 294 IPR029058 -
Trme42318g00001 296 SUPERFAMILY alpha/beta-Hydrolases 151 214 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme42318g00001 Trme-Chr42318 44 934 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme42318g00001 1 294 Carbohydrate Esterase AT3G27320 51.020 8.25e-89 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme42318g00001 - - adu:107494848 301.597