Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme42316g00001 GTGGAACATGTAGAGGAACATCTACAGTTTCTGAGGTCATTTGCAGACCTAGATGATGAACAAATATTTAAGATAGTGTTGGTGTTTCCAGCTATCTTTACTAATAACAGGGAGAGGAAACTGCGTCCTAGAATACAATTTCTCAAGGAATGTGGGTTAGATTCTAGCGATATCTTCAAGTTCTTGATCCAAGCACCGGTGTTTTTGAGCGCTTCATTTCGCGAGAACCTTGCGTATAAGTTTGTGTTTCTGGTTAAGATTGGGTATAAATATAGGACGAAAGAGTTGGCAATGGCGATTGCGGCTTCAACTAGAATAAGCTGTGAGAATATGCAGAAGGTGGTGAGTTTATTCTTGAATTACGGCTTTTCATTTGAAGACATTTTTGCTATGAGTATGAAGCAGCCATTGATACTACGGTATAATCATGCCTCTGTAGAGAAGAAGATGAAGTACTTGATAGAGGAAATGAATCGTGACATCCGGGAGTTGCTGGATTTTCCTGCATTTCTTGGGTACAAGTTTGATGACAGAATTAAGCATAGGCATGANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNAGATTCTTCTGTAAAATCTGAACTAAAATAA 669 0.3363 VEHVEEHLQFLRSFADLDDEQIFKIVLVFPAIFTNNRERKLRPRIQFLKECGLDSSDIFKFLIQAPVFLSASFRENLAYKFVFLVKIGYKYRTKELAMAIAASTRISCENMQKVVSLFLNYGFSFEDIFAMSMKQPLILRYNHASVEKKMKYLIEEMNRDIRELLDFPAFLGYKFDDRIKHRHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSSVKSELK 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme42316g00001 222 SMART mt_12 23 54 IPR003690 GO:0003690|GO:0006355
Trme42316g00001 222 SMART mt_12 59 90 IPR003690 GO:0003690|GO:0006355
Trme42316g00001 222 SMART mt_12 129 160 IPR003690 GO:0003690|GO:0006355
Trme42316g00001 222 PANTHER CGI-12 PROTEIN-RELATED 3 184 IPR003690 GO:0003690|GO:0006355
Trme42316g00001 222 Gene3D Transcription termination factor 3, mitochondrial 1 191 IPR038538 -
Trme42316g00001 222 Pfam mTERF 105 184 IPR003690 GO:0003690|GO:0006355
Trme42316g00001 222 Pfam mTERF 8 93 IPR003690 GO:0003690|GO:0006355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Trme42316g00001 mTERF 1.5e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme42316g00001 - - gmx:100799904 275.404