Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme42307g00001 GATCGTATTCCAGCTGATGGGATTGTGAGAGCTGGTAGAAGTAGTGTAGATGAGTCAAGTTTCACCGGGGAGCCGCTGCCTGTAACCAAAGAACTTGGGAGTGAGGTTGCAGCTGGAAGTATAAATCTTAATGGAACTCTTACAATAGAGGTGCGGAGACCAGGTGGTGAGACTGCTATAGGAGACATTATTCGTCTAGTTGAAGAGGCACAAAGTAGAGAAGCTCCTGTACAACGGTTAGCTGACAAG 249 0.4699 DRIPADGIVRAGRSSVDESSFTGEPLPVTKELGSEVAAGSINLNGTLTIEVRRPGGETAIGDIIRLVEEAQSREAPVQRLADK 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme42307g00001 83 PANTHER ATP7, ISOFORM B 1 83 - -
Trme42307g00001 83 Pfam E1-E2 ATPase 1 83 - -
Trme42307g00001 83 SUPERFAMILY Calcium ATPase, transduction domain A 1 67 IPR008250 -
Trme42307g00001 83 Gene3D - 1 71 - -
Trme42307g00001 83 MobiDBLite consensus disorder prediction 1 27 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme42307g00001 Trme-Chr42307 357 931 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme42307g00001 2 82 Primary Pumps ATPases AT5G44790 46.914 5.13e-20 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme42307g00001 K17686 - tcc:18608294 152.91