Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme422421g00001 GATTGTGCTGTTCTCATCATTGATTCCACTACTGGTGGTTTTGAAGCTGGTATTTCCAAGGACGGACAGACCCGTGAACATGCTCTCCTTGCTTTCACTCTTGGTGTGAAGCAAATGATCTGTTGCTGCAACAAGGTATTGAATGTTTAA 150 0.4333 DCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKVLNV 49
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme422421g00001 49 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 46 IPR027417 -
Trme422421g00001 49 Gene3D - 1 48 IPR027417 -
Trme422421g00001 49 PANTHER TRANSLATION FACTOR 1 46 - -
Trme422421g00001 49 Pfam Elongation factor Tu GTP binding domain 1 46 IPR000795 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme422421g00001 Trme-Chr422421 2 151 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme422421g00001 1 46 Eukaryotic Initiation Factors Gene Family AT1G07930 97.826 1.46e-28 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme422421g00001 K03231 - oeu:111393027 98.2117