Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme4217g00001 ATGTTTTTGTCAAATATTGATTTGTCCCTTGTTGTTTACCAAGATTCTGCCTCTTTCTTTGATCCTCCAACCAACCAAGTGTGCTTTTCTGAGATTTGTAGCAAATTATATAATTCACTTAGTAAAATGCTTGTACATTATGATTTTATGGCCGGCCGGCTTGTGCCGAGTTTGGTAGAGAAAAACCGATTTGAAATTGATTGTAATGATGCCGGTATTGTTGTTGCTGCTGCGAAAACGGATAGAAAGTTAAGTGAATTTGGTATTATTTCAGCACCTAATCCTGAGTTAAAGGAATTGGTTGTTTTCTTGCTTCAAGAGGCTAATGACGAAACTGACCTTAAAGAATTTCCACTTGCTTCCTTACAGCTTACACAATTCGGATGTGGAAGTTTAGCACTAGCTTCTCATTACAATCATTGCATACTCGACGGTATTGCAGTAAGAGAATTCGAGGCGAATTTGGCATCTCTAACACGCGGAGACGATTTCATCATAATACCTAATGCAGATAGAACATTACTGAGGGCTAGAAACCCACCAAAGATAAGTCATCCACATTTTGAATACTCAAAAACTAGAAACACCGAAAATTTGTTCACAATACGCGGAACAACTAGCACCAATGTTAAAAAAACCTTGGTAGAGAATCAAATTCATGTACTTCATTTATCACCACAAAAAATTGCAAGCTTAAAAAAGAAAGCTTTAGAGAACATGACATTAAAAAACATCACAACATTTCAAGTTGTCGCTGCAAAAATATGGAAAGCAAGAAGCATAGCGACAAAGATGGCAGAAGAAAAAGTGTCAACAATATTGTTTCCAGTTGATGTTAGAAAAAAGGTTGTTCCGGAACTTCCAAACGGGTTTGCAGGAAATGCATTGGTTCCTGGATTTGCAAGAGCAACGGTTAAGGAACTTATGGAACTAGAAGATGATTTTGTTATAAGGAAAGTGCAAGAAGGGATTGAA 975 0.3692 MFLSNIDLSLVVYQDSASFFDPPTNQVCFSEICSKLYNSLSKMLVHYDFMAGRLVPSLVEKNRFEIDCNDAGIVVAAAKTDRKLSEFGIISAPNPELKELVVFLLQEANDETDLKEFPLASLQLTQFGCGSLALASHYNHCILDGIAVREFEANLASLTRGDDFIIIPNADRTLLRARNPPKISHPHFEYSKTRNTENLFTIRGTTSTNVKKTLVENQIHVLHLSPQKIASLKKKALENMTLKNITTFQVVAAKIWKARSIATKMAEEKVSTILFPVDVRKKVVPELPNGFAGNALVPGFARATVKELMELEDDFVIRKVQEGIE 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme4217g00001 325 Gene3D - 203 325 IPR023213 -
Trme4217g00001 325 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 2 323 - -
Trme4217g00001 325 Pfam Transferase family 1 324 - -
Trme4217g00001 325 Gene3D - 1 192 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme4217g00001 Trme-Chr4217 920 2257 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme4217g00001 1 310 Monolignol Biosynthesis Gene Families AT5G48930 28.296 3.15e-37 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme4217g00001 K15400 - gmx:100801822 511.916