Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme42127g00001 GGTTGTGATGCCTCAGTTTTGCTGAACAAAACTGATACCATTGTGACAGAACAAGATGCTTTCCCAAATATCAACTCTTTAAGAGGTTTGGATGTTGTGAACCAAATCAAAACAGCAGTGGAAAAAGCTTGTCCTAACACAGTTTCTTGTGCTGATATTCTTGCACTTGCCGCGGAATTATCTTCTACCCTGTCTCAAGGTCCTGATTGGAAAGTTCCACTTGGAAGAAGGGATAGTTTAACCGCAAACCAAACACTTGCTAATCAAAACCTTCCAGCTCCTTTCAACTCATTGGATCAACTTAAAGCTGCATTTGCCGCTCAAGGCCTCAACACCACTGATCTAGTTGCTCTCTCGGGTATGTAA 366 0.4235 GCDASVLLNKTDTIVTEQDAFPNINSLRGLDVVNQIKTAVEKACPNTVSCADILALAAELSSTLSQGPDWKVPLGRRDSLTANQTLANQNLPAPFNSLDQLKAAFAAQGLNTTDLVALSGM 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme42127g00001 121 Gene3D - 1 112 - -
Trme42127g00001 121 PRINTS Haem peroxidase superfamily signature 66 78 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trme42127g00001 121 PRINTS Haem peroxidase superfamily signature 48 65 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trme42127g00001 121 PRINTS Haem peroxidase superfamily signature 114 121 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trme42127g00001 121 ProSiteProfiles Plant heme peroxidase family profile. 1 121 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trme42127g00001 121 PANTHER PEROXIDASE 72-RELATED 1 120 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme42127g00001 121 Pfam Peroxidase 1 121 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trme42127g00001 121 SUPERFAMILY Heme-dependent peroxidases 1 120 IPR010255 GO:0004601|GO:0006979|GO:0020037
Trme42127g00001 121 PRINTS Plant peroxidase signature 113 121 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme42127g00001 121 PRINTS Plant peroxidase signature 28 41 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme42127g00001 121 PRINTS Plant peroxidase signature 47 57 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme42127g00001 121 PRINTS Plant peroxidase signature 66 81 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme42127g00001 Trme-Chr42127 103 572 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme42127g00001 1 120 Peroxidase AT3G49120 61.983 2.12e-45 148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme42127g00001 K00430 - gmx:112997600 192.2