Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme420616g00001 ATGAACGTTGGAACAAACCGAGGTGATGCGCATGCATTCAAGCTCGATACACTTCTCAAGCTGGTTGATGTCAAAGGTGCAGACGGAAAAACAACTCTTCTACACTTTGTTGTACAAGAAATCATTAGAACTGAAGGAGCTCGTCATTCGGATACTACTACTGATCAAACACCAGCCGCAACATTGAGCGACGATGCCAAGTGTAGAAGACTCGGCCTTCAAGTAGTATCTAGTCTAAGTTCCGATCTAGCCAATGTGAAGAAAGC 266 0.4436 MNVGTNRGDAHAFKLDTLLKLVDVKGADGKTTLLHFVVQEIIRTEGARHSDTTTDQTPAATLSDDAKCRRLGLQVVSSLSSDLANVKKA 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme420616g00001 89 PANTHER FORMIN-RELATED 1 89 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Trme420616g00001 89 Gene3D Formin, FH2 domain 1 89 IPR042201 -
Trme420616g00001 89 Pfam Formin Homology 2 Domain 1 89 IPR015425 -
Trme420616g00001 89 SUPERFAMILY Formin homology 2 domain (FH2 domain) 1 89 - -
Trme420616g00001 89 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1 89 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme420616g00001 Trme-Chr420616 1 266 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme420616g00001 1 89 FH2 protein (formin) Gene Family AT3G25500 77.528 7.40e-38 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme420616g00001 - - cam:105851496 146.362