Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme420342g00001 GAGAAGGAGATTGGTAACAATGGTTTGAAGAAGAAGCTTGTTAAGGAAGGTCAAGGATGGGAAACTCCTGATATTGGAGATCAAGTTGAAGTTCATTATACTGGCACTTTGCTTGATGGAACCAAATTCGATTCTAGCCGTGATAGGGCCACCACTTTCAAGTTTAAGCTTGGTCAAG 178 0.4157 EKEIGNNGLKKKLVKEGQGWETPDIGDQVEVHYTGTLLDGTKFDSSRDRATTFKFKLGQ 59
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme420342g00001 59 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 2 59 - -
Trme420342g00001 59 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 21 59 IPR001179 GO:0003755
Trme420342g00001 59 SUPERFAMILY FKBP-like 6 59 - -
Trme420342g00001 59 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 26 59 IPR001179 GO:0003755
Trme420342g00001 59 Gene3D - 2 59 IPR046357 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme420342g00001 Trme-Chr420342 26 300 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme420342g00001 1 59 Calmodulin-binding Proteins AT5G48570 77.966 5.28e-26 96.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme420342g00001 K09571 - qsa:O6P43_023604 115.161