Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme41936g00001 ATGGTGTACTGTCGTTCCGATGCGGCATGTTTATGTTTGTCGTGTGACCGAAATGTTCATTCAGCGAATACGCTTGCTCGAAGGCATTCGAGGACACTTTTATGTGAAAGATGCAGTTCACAACCAGCTTTGGTTAGGTGTTCTGAAGAGAAAATTTCACTTTGTCAGAATTGTGATTGGTTAGGTCATGGTAATAACTCTACATCTTCCAATCATAAGAGACAAACAATCAATTGTTACTCCGGTTGTCCTTCGTCGTCCGAACTTTCTTCAATATGGTCTTTTGTGTTGGATATCCCTTCTCTGAGTGAAACTACATGTGAGCAAGAATTAGGTTTCATGAGTATTAATGAGAATAGGAGTGCTTGGGTCGATCCGAAAAACCAGAATGTTTCTGATTCAGATAAAGCTACTGATTTACCTGATTCGGATAAGTCTTTCGTCGGTACATCTTCAATGCCAGAATCAAGCAAAGAACCGCGTATGCTCGACCGTTCAGATGGACCTACCAATGAATGTGTGCCAAAGTTATACTGTCCTGCTACAAAATGCCCTGAAGCAAGTGAAGATGATGATGATCTGTACGGCGATTTCGATATGGATGAAATGGATATAAACATTGAGAACTATGATGAACTTTTTGGTATGGCCCTTACTCATTCTGAAGAGCTTTTTGAAAATGGTGGATTTAACAGCTTATTTGGAGGAAAGGCCATGTCTGCTGGAGATTCCAATTGTCAAGATGCTATTG 751 0.4048 MVYCRSDAACLCLSCDRNVHSANTLARRHSRTLLCERCSSQPALVRCSEEKISLCQNCDWLGHGNNSTSSNHKRQTINCYSGCPSSSELSSIWSFVLDIPSLSETTCEQELGFMSINENRSAWVDPKNQNVSDSDKATDLPDSDKSFVGTSSMPESSKEPRMLDRSDGPTNECVPKLYCPATKCPEASEDDDDLYGDFDMDEMDINIENYDELFGMALTHSEELFENGGFNSLFGGKAMSAGDSNCQDAI 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme41936g00001 250 ProSiteProfiles Zinc finger B-box type profile. 30 77 IPR000315 GO:0008270
Trme41936g00001 250 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 1 238 - -
Trme41936g00001 250 MobiDBLite consensus disorder prediction 124 169 - -
Trme41936g00001 250 CDD Bbox1_BBX-like 34 77 - -
Trme41936g00001 250 SMART bboxneu5 35 77 IPR000315 GO:0008270
Trme41936g00001 250 SMART bboxneu5 1 34 IPR000315 GO:0008270
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme41936g00001 1 245 C2C2-CO-like Transcription Factor Family AT3G07650 48.473 9.49e-76 232
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme41936g00001 - - gmx:100796748 401.364