Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme41851g00001 ATGGAAATTCAAAGCCGTTTATCAGATATAACCGATGATGAACCTAAGCTTCAGATATTCTCTGCAACCCATCAGAAGCCTTCCCATTCCCTAGCCAAGCAAGAACATGCTTTTTCTGGAGCGTTGGCTGGAATATGTGTCAGCTGTTGTCTGCATCCTGTTGACACAATCAAGACAGTTGTTCAATCATGTCGTGCAGAACAGAGGTCCATCTTTTACATTGGCAAATCAATTATTTCTGATAGAGGTTTTCCTGGACTATATCGTGGAATTACTACAAACATTGCATGTTCAGCTCCAATTTCTGCAGTTTATACTTTCACGTATGAATCGGTTAAAGCAGCTTTGCTTCCTTATCTTCCAAAGGAGAATTATTCTTTTGCCCATTGTGTGGGAGGTGGTTGTGCAAGCATTGCCACATCTTTCATCTTCACTCCTAGTGAGCGAATAAAGCAGCAAATGCAAGTTGGATCTCATTATCGCAACTGCTG 491 0.4134 MEIQSRLSDITDDEPKLQIFSATHQKPSHSLAKQEHAFSGALAGICVSCCLHPVDTIKTVVQSCRAEQRSIFYIGKSIISDRGFPGLYRGITTNIACSAPISAVYTFTYESVKAALLPYLPKENYSFAHCVGGGCASIATSFIFTPSERIKQQMQVGSHYRNC 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme41851g00001 163 Pfam Mitochondrial carrier protein 35 117 IPR018108 -
Trme41851g00001 163 SUPERFAMILY Mitochondrial carrier 35 160 IPR023395 -
Trme41851g00001 163 PANTHER S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN 15 162 - -
Trme41851g00001 163 FunFam Mitochondrial substrate carrier protein-like 10 157 - -
Trme41851g00001 163 Gene3D Mitochondrial carrier domain 10 163 IPR023395 -
Trme41851g00001 163 ProSiteProfiles Solute carrier (Solcar) repeat profile. 31 115 IPR018108 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme41851g00001 14 157 Chloroplast and Mitochondria Gene Families AT1G07030 34.437 3.13e-14 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme41851g00001 - - pvu:PHAVU_002G289600g 277.715