Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme418491g00001 ATGCATAGAGATTTGAAGCCTTCCAACATATTGCTTGATGAAAACATGCATGCCAAGATTGCTGATTTTGGTCTAAGTAGAGCTTTTGATGATGACATTGATTCTCATATATCCACGTGTCCTGCCGGTACACTTGGTTACGCGGCTCCTGA 152 0.4211 MHRDLKPSNILLDENMHAKIADFGLSRAFDDDIDSHISTCPAGTLGYAAP 50
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme418491g00001 50 SUPERFAMILY Protein kinase-like (PK-like) 1 50 IPR011009 -
Trme418491g00001 50 Pfam Protein kinase domain 1 50 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme418491g00001 50 Gene3D Transferase(Phosphotransferase) domain 1 1 50 - -
Trme418491g00001 50 ProSiteProfiles Protein kinase domain profile. 1 50 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme418491g00001 50 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 2 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme418491g00001 Trme-Chr418491 119 270 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme418491g00001 1 50 Receptor kinase-like Gene Family AT1G70520 70.000 3.27e-18 73.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-Pp-1 Trme418491g00001 Pkinase 3.2e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme418491g00001 - - mtr:25500367 91.6633