Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme41838g00001 GTGGATAGGAGATACAATCACTATTGTGAACAAATGCAAATGGTAGTGAACTCATTTGATCTAATGATGGGTTTTGGAGCAGCAGTTCCATACACATCACTAGCTCAAAAAGCGATGTCTCGACATTTCCGGTGTCTAAAGGATGCAATAACAGTACAACTGAAGCAAAGTTGTGAGATACTTGGAGAGAAAGAAGGTGCAGGAGGAGGCTTAACGAAAGGAGAGACCCCTAGACTTAAGGTACTTGAACAAAGCCTAAGACAACAAAGAGCATTTCATCAAATGGGTATGATGGATCAAGAAGCTTGGAGACCTCAAAGAGGATTGCCTGAACGTTCTGTCAATGTTTTGAGAGCTTGGCTTTTTGAGCATTTTCTACACCCAACTAGTCCTTAA 396 0.4141 VDRRYNHYCEQMQMVVNSFDLMMGFGAAVPYTSLAQKAMSRHFRCLKDAITVQLKQSCEILGEKEGAGGGLTKGETPRLKVLEQSLRQQRAFHQMGMMDQEAWRPQRGLPERSVNVLRAWLFEHFLHPTSP 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme41838g00001 131 Pfam Associated with HOX 1 51 IPR006563 -
Trme41838g00001 131 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 2 128 - -
Trme41838g00001 131 Gene3D - 109 129 - -
Trme41838g00001 131 SMART prehox3 1 52 IPR006563 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme41838g00001 Trme-Chr41838 58 577 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme41838g00001 1 128 Homeobox Transcription Factor Family AT4G36870 83.969 1.51e-80 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme41838g00001 - - gmx:100777243 252.677