Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme41788g00001 ATGGACACAGCAAGATACGAGAAAGCAATTAAAGCTTGTGCCTTAGATAAGGATATAAGTGATTTTAGCCATGGTGATCTTACAGAAATTGGTCAAAGAGGGATCAACATGAGTGGAGGACAAAAACAAAGGATTCAACTAGCTAGATCAGTCTACTATGATGCTGATATCTATCTCCTTGATGATCCTTTCAGTGCAGTTGATGCACATACAGCTGCAATATTATTCAATGATTGTGTCATGACTGCTTTAAGAAAGAAAACAGTCATTCTAGTTACTCATCAAGTGGAGTTTCTCTCACAAGTTGATTCTATCTTGGTGGAAAAGTTATTCAATCAGGTAGTTATGAAAATCTCCTGA 360 0.3667 MDTARYEKAIKACALDKDISDFSHGDLTEIGQRGINMSGGQKQRIQLARSVYYDADIYLLDDPFSAVDAHTAAILFNDCVMTALRKKTVILVTHQVEFLSQVDSILVEKLFNQVVMKIS 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme41788g00001 119 FunFam Multidrug resistance associated protein, putative 1 69 - -
Trme41788g00001 119 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 107 IPR027417 -
Trme41788g00001 119 Gene3D - 1 115 IPR027417 -
Trme41788g00001 119 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 1 107 - -
Trme41788g00001 119 Pfam ABC transporter 27 64 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme41788g00001 Trme-Chr41788 104 849 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme41788g00001 17 107 Calmodulin-binding Proteins AT2G36910 37.363 8.49e-12 58.9