Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme41785g00001 ATGTTAGGTAAGAGGAAGGGTACAAGGGAGGCAAGGCTTCCCACAAAGATTCTTTGGATGAGGAGAATGCGTGTGCTTAGACGCTTGCTCCGCAAGTACCGAGAGTCTAAGAAGATTGACAAGCACATGTATCATGACATGTATATGAAGGTTAAGGGTAATGTGTTTAAGAATAAGAGAGTTCTAATGGAAAGTATCCACAAGAGTAAAGCTGAGAAGGCTAGGGAGAAGACCTTATCTGACCAGTTCGAGGCCAAGCGTGCCAAGAACAAGGCCAGCCGAGAAAGGAAGCATGCTCGGAGGGAGGAGCGTTTCGCTCAAGGTCCTGGAGCAGAGAAACCAGCAGCTGCTCCTAGTGCTGCACCTGCTGCAGCAGCACAGCCAACCCAAGCATCAAAGAAATCAAAGAAGGCAGCAGCAGTCTGA 426 0.4883 MLGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMYHDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKHARREERFAQGPGAEKPAAAPSAAPAAAAQPTQASKKSKKAAAV 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme41785g00001 141 MobiDBLite consensus disorder prediction 68 108 - -
Trme41785g00001 141 SUPERFAMILY Ribosomal protein L19 (L19e) 2 68 IPR035970 GO:0003735|GO:0005840|GO:0006412
Trme41785g00001 141 Gene3D - 1 114 - -
Trme41785g00001 141 Pfam Ribosomal protein L19e 3 69 IPR000196 GO:0003735|GO:0005840|GO:0006412
Trme41785g00001 141 PANTHER 60S RIBOSOMAL PROTEIN L19 2 113 IPR039547 GO:0003723|GO:0003735|GO:0022625
Trme41785g00001 141 MobiDBLite consensus disorder prediction 68 141 - -
Trme41785g00001 141 SMART Ribosomal_L19e_2 1 70 IPR000196 GO:0003735|GO:0005840|GO:0006412
Trme41785g00001 141 FunFam Ribosomal protein L19 1 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme41785g00001 Trme-Chr41785 27 657 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme41785g00001 3 137 Cytoplasmic Ribosomal Protein Gene Family AT3G16780 81.481 5.76e-72 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme41785g00001 K02885 - ming:122085408 194.897