Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme41640g00001 ATGGTGAACTCTGATTTGACTAGGATTATTAATTCTGATGAAGTTCAATCTGTTGTGAGGCCGATTAAGAAGGATGTTAAGCGTCTGTCGCTTAAGAAGAATCCTCTTAAGAATCTTAATGTTATGCTTAGGCTTAATCCTTATGCTAAGACTGCTAAGAGAATGGCTTTACTTGCTGAGGCTGAGAGGGTTAAGGCTAAGAAGGAGAAGCTTGACAAGAAGAGAAAGACTGTTTCCAAGGTGATGTTGATATCTATATATTGTGCTCAGTTTTGGTGA 279 0.3835 MVNSDLTRIINSDEVQSVVRPIKKDVKRLSLKKNPLKNLNVMLRLNPYAKTAKRMALLAEAERVKAKKEKLDKKRKTVSKVMLISIYCAQFW 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme41640g00001 92 Pfam 60S ribosomal protein L4 C-terminal domain 1 64 IPR025755 -
Trme41640g00001 92 PANTHER 60S RIBOSOMAL PROTEIN L4 1 77 IPR045240 -
Trme41640g00001 92 Coils Coil 54 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme41640g00001 Trme-Chr41640 665 943 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme41640g00001 1 92 Cytoplasmic Ribosomal Protein Gene Family AT3G09630 76.087 1.91e-32 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme41640g00001 K02930 - gmx:100779764 121.709