Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme41639g00001 TTGGCAGGACTTGCATTCAAGAAGAAGTGGCAGAACAAACGCAAGGCCGAAGGCAAACCTTATGATAAGCCTAACTTGGTCACTGGTGCCAATGTGCAGGTATGTTGGGAGAAATTTGCTAGGTATTTTGAGGTGGAATTAAGGGAAGTAAATGTGAGAGAAGATTACTATGTAATGGACCCTGCAAAGGCCGTTGAGATGGTAGATGAGAACACAATTTGCGTGGCTGCAATCTTAGGTTCAACTTATAACGGAGAATTTGAAGACGTCAAACTCTTGAATGATCTTTTGTTAGAGAAAAACAAGCAAACTGGATGGGATACACCGATTCATGTTGATGCCGCGAGTGGTGGCTTTATTGCTCCTTTCCTATATCCCGAGCTAGAGTGGGATTTCAGACTCCCATTAGTGAAGAGCATAAATGTTAGTGGCCATAAGTATGGACTTGTTTATGCCGGAATCGGCTGGGTTATWTGGAGGACTAAAGAAGACTTGCCTGAAGACCTTATCTTCCATATCAATTACCTTGGAGCTGACCAACCCACCTTCACTCTAAATTTTTCAAAAGGTTCTAGTCAGATAATTGCTCAATATTATCAGCTAATTCGCCTTGGTCAAGAG 621 0.4219 MAGLAFKKKWQNKRKAEGKPYDKPNLVTGANVQVCWEKFARYFEVELREVNVREDYYVMDPAKAVEMVDENTICVAAILGSTYNGEFEDVKLLNDLLLEKNKQTGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRTKEDLPEDLIFHINYLGADQPTFTLNFSKGSSQIIAQYYQLIRLGQE 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme41639g00001 207 PANTHER GLUTAMATE DECARBOXYLASE 1 207 IPR010107 GO:0004351|GO:0006536|GO:0030170
Trme41639g00001 207 Pfam Pyridoxal-dependent decarboxylase conserved domain 1 206 IPR002129 GO:0016830|GO:0019752|GO:0030170
Trme41639g00001 207 Gene3D - 1 207 IPR015421 GO:0003824
Trme41639g00001 207 SUPERFAMILY PLP-dependent transferases 1 206 IPR015424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme41639g00001 Trme-Chr41639 226 1032 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme41639g00001 1 207 Calmodulin-binding Proteins AT2G02010 91.304 2.84e-143 409
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme41639g00001 K01580 - gmx:100781791 405.986