Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme41571g00001 ATGTTCATAAACTGTTACAATGACATTTGGAATACATTTCAGGTGATGATGAATGCTATGAATGTTCCTTCCAAAAGAAGTACACTGGAGAGGAAACTTGACAAGCTCATACTCACTCTATTTGCAACTCTCTTTACGATGTGTTTTATAGGAGCTGTAGGCAGTTCTATCTTTGTAAACACGAAGTATTTCTATTTACATCTTGACTCACCAGAAGAGGATGGCTTAGCACAGTTCAATCCAGGAAATAGAATTGGGGTTTTTCTTCTGACTATGTTTACCCTCATCACGTTATACTCAACAATCATCCCTATTTCACTCTATGTATCAATAGAG 336 0.3661 MFINCYNDIWNTFQVMMNAMNVPSKRSTLERKLDKLILTLFATLFTMCFIGAVGSSIFVNTKYFYLHLDSPEEDGLAQFNPGNRIGVFLLTMFTLITLYSTIIPISLYVSIE 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme41571g00001 112 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 14 112 - -
Trme41571g00001 112 SUPERFAMILY Calcium ATPase, transmembrane domain M 20 111 IPR023298 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme41571g00001 Trme-Chr41571 27 577 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme41571g00001 14 112 Primary Pumps ATPases AT1G59820 58.586 2.93e-28 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme41571g00001 K14802 - gmx:100815547 167.162