Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme415260g00001 ACTTTCTCTGAATATCCTCCACTCGGCCGTTTTGCTGTGAGGGACATGCGTCAAACTGTGGCTTTTGGAGTTATCAAGGCTGTGGAGAAGAAGGACCCCGGCGGAGGAAGGTGTAACTGTTCATTCAAGAAGAAATGA 138 0.4855 TFSEYPPLGRFAVRDMRQTVAFGVIKAVEKKDPGGGRCNCSFKKK 45
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme415260g00001 45 Gene3D Translation factors 1 29 - -
Trme415260g00001 45 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 1 28 IPR009001 -
Trme415260g00001 45 PANTHER ELONGATION FACTOR 1 ALPHA 1 44 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme415260g00001 Trme-Chr415260 1 138 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme415260g00001 1 39 Eukaryotic Initiation Factors Gene Family AT5G60390 79.487 1.07e-16 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme415260g00001 K03231 - csav:115719034 73.1738