Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme41511g00001 ATGGGTGGAAGTCAAGTTTTAACTTCACAAGGGGGTGATGGTGATTGCCGACTAATATGTGAAATTGGTCCATCAGGTTCCACAGGAAGTTCTTTTATTCAAGTGGAAACAGAAGCAATGAAAGAGGAAGCCCAAGTTAAGCTNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNGAACTGCAATCAAAGGTGGCCGCTTTGGTGGATCCGAATTCTGAACCCGGAGAGACTCGGACAAGACGTGGGAGAAGGAAAGATATAGATAGTGCAGTTCCTGCTAAACGAACCAAGGTCAATATGCTTCCTATCAATGAATTGACTTGGCCAGAACTAGCTCGTAGATATATCTTGGCTTTCTTATCAATGGATGGTAACCTTGAGTCTGCGGAAATTACTGCCCGTGAAAGTGGTAAAGTATTTCGTTGCTTACGAGGCGATGGTGGTTTGCTGTGCGGTTCCCTTACTGGCGTGGCTGGGATGGAAGCTGATGCACTGGTGAGAGCATAG 555 0.3946 MGGSQVLTSQGGDGDCRLICEIGPSGSTGSSFIQVETEAMKEEAQVKLXXXXXXXXXXXXXXXXXXXXXXXXXXELQSKVAALVDPNSEPGETRTRRGRRKDIDSAVPAKRTKVNMLPINELTWPELARRYILAFLSMDGNLESAEITARESGKVFRCLRGDGGLLCGSLTGVAGMEADALVRA 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme41511g00001 184 Coils Coil 75 79 - -
Trme41511g00001 184 MobiDBLite consensus disorder prediction 83 104 - -
Trme41511g00001 184 PANTHER OS02G0192300 PROTEIN 26 182 - -
Trme41511g00001 184 MobiDBLite consensus disorder prediction 90 104 - -
Trme41511g00001 184 Coils Coil 41 48 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme41511g00001 Trme-Chr41511 349 903 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme41511g00001 75 184 C2H2 Transcription Factor Family AT3G01460 78.182 1.48e-53 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme41511g00001 K22768 - gmx:100791814 225.713