Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme414974g00001 ATTGCTGTCAAGTTTGCTGAGCTTGTTACCAAGATTGACAGGCGTTCTGGTAAGGAAATTGAGAAGGAGCCCAAATTCTTGAAGAACGGTGATGCTGGTATTATTAAGATGGTTCCTACCAAGCCCATGGTTGTTGAGACTTTCTCGGAATATCCTCCACTCGGCCGTTTCGCTGTCAGAGATATGCGTCAAACTGTTGCTGTTGGAGTTATCAAGGCTGTGGAGAAGAAGGAAGCTGGTACAGGTAAGATCACCAAGTCAGCATTGAAGAAGAAGTGA 279 0.4516 IAVKFAELVTKIDRRSGKEIEKEPKFLKNGDAGIIKMVPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKAVEKKEAGTGKITKSALKKK 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme414974g00001 92 PANTHER ELONGATION FACTOR 1 ALPHA 1 92 - -
Trme414974g00001 92 Gene3D Translation factors 1 75 - -
Trme414974g00001 92 Pfam Elongation factor Tu C-terminal domain 1 74 IPR004160 -
Trme414974g00001 92 FunFam Elongation factor 1-alpha 1 75 - -
Trme414974g00001 92 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 1 74 IPR009001 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme414974g00001 Trme-Chr414974 23 301 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme414974g00001 1 85 Eukaryotic Initiation Factors Gene Family AT1G07930 83.529 7.59e-46 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme414974g00001 K03231 - mof:131166800 165.236