Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme41324g00001 ATGGATGTGCTACAGATTAGTGTTGATGGACTTGAATATGAGGAGAAGGAAATATTTCTGCACATTGCTTGCTTCTTTAAAGGGGAGAGGGAAGATTATGTAAAGCGAATTCTAGATGCTTGTGGATTATACTCTCACATTGGAATTCAAAGAATCCTGGAGAAATCACTCATTACCATTAAAAACCAGGAGATTCATATGCATGATATGTTACAAGAACTGGGGAAGAAAATTGTTCGGCACGGATTTCCCAAAGAACCAGGATCGTCGAGCAGATTATGGCAATGCAGTGATTTCTATCATGTCTTGATGACAAAAACGGCTGATGGCAGTAACGTATTTTTTAGGCTGATGGCAGTTTTGGTCATTAAAGACACCCCAATTTCAGCTTAA 393 0.3893 MDVLQISVDGLEYEEKEIFLHIACFFKGEREDYVKRILDACGLYSHIGIQRILEKSLITIKNQEIHMHDMLQELGKKIVRHGFPKEPGSSSRLWQCSDFYHVLMTKTADGSNVFFRLMAVLVIKDTPISA 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme41324g00001 130 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 3 103 IPR044974 GO:0006952
Trme41324g00001 130 SUPERFAMILY "Winged helix" DNA-binding domain 2 103 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme41324g00001 Trme-Chr41324 456 990 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme41324g00001 1 106 WRKY Transcription Factor Family AT5G45050 39.623 1.21e-23 93.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme41324g00001 - - vvo:131653600 186.422