Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme41293g00001 ATGGCACGTGCAGTTGCTTCTGAAGCAGGACTGAACTTTCTAGCAGTCAAGGGTCCTGAACTCTTCAGCAAATGGGTTGGCGAATCTGAGAAGGCTGTCAGATCATTGTTTGTTAAAGCAAGGGACAATGCCCCATCAGTAATATTTTTCGATGAAATAGATAGTCTTGCTATGAATCGTGGGAGAGATGGTGATGGTGTTTCAGTGTCCGATAGGGTCATGGCTCAACTCCTTGTTCAAATGGATGGTGTGCGTAGCAGAGGTGATGTTGCTGTTATAGCTGCTACAAATAGGCCAGACAATATTGATCCTGCTCTTTTAAGACCAGGACGATTTGACCGTCAGCTATATGTTGGACCTCCAAATGAGAAGGACCGAGAAGAGATCTTTAGCATTCATTTGCGCAAAACTCCATATGATTCTGATGTTAGCATGAAAGAACTGGCTCAACTGACAGATGGTTATACTGGGGCTGATATATCACTTGAAAGCTTTGATTCTTCTGTTGTAACAATGAAGCACTTTAAGACGGCAATCGAACAAGTTCAGCCCTCTGAAATTCAGTTCTATCAAAAGTTCTCAGCAACATTTCATAGGGGCGTGCGCTCTGATGCGGTCGATATAAATGGTTAA 633 0.4313 MARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFVKARDNAPSVIFFDEIDSLAMNRGRDGDGVSVSDRVMAQLLVQMDGVRSRGDVAVIAATNRPDNIDPALLRPGRFDRQLYVGPPNEKDREEIFSIHLRKTPYDSDVSMKELAQLTDGYTGADISLESFDSSVVTMKHFKTAIEQVQPSEIQFYQKFSATFHRGVRSDAVDING 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme41293g00001 210 ProSitePatterns AAA-protein family signature. 90 108 IPR003960 GO:0005524|GO:0016887
Trme41293g00001 210 Gene3D - 121 187 - -
Trme41293g00001 210 PANTHER AAA-FAMILY ATPASE 1 198 - -
Trme41293g00001 210 Pfam ATPase family associated with various cellular activities (AAA) 1 119 IPR003959 GO:0005524|GO:0016887
Trme41293g00001 210 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 184 IPR027417 -
Trme41293g00001 210 Gene3D - 1 120 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme41293g00001 Trme-Chr41293 7 988 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme41293g00001 1 204 Calmodulin-binding Proteins AT3G56690 67.442 2.41e-94 294
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme41293g00001 - - tpra:123888657 395.971