Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme412715g00001 CAAGTATGTGCAAATGCTGGGACACCTCAATTTAGAAACCCGCCGGTGAATTTCGATGAGACACCGACAGTGCTTGATAACTTGTTTTTCAAGAATATGGTGTTTAGAAACAAGACAACTATGCTTACAGATTCTCATTTGATTAATGATCCTAGAACAATTCCTATTGTTCAACAGATGGCCAATCAGGATGGTTTGTGGCAACAAAGGTTTCCTGAGGTTATGGATAAAATGAGTGCTATGAATGTTCTTACCGGAAATAATGGTGAAGTGAGGAAGACTTGTAGGTCCACTAATTAA 300 0.3867 QVCANAGTPQFRNPPVNFDETPTVLDNLFFKNMVFRNKTTMLTDSHLINDPRTIPIVQQMANQDGLWQQRFPEVMDKMSAMNVLTGNNGEVRKTCRSTN 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme412715g00001 99 Gene3D - 79 99 - -
Trme412715g00001 99 SUPERFAMILY Heme-dependent peroxidases 6 99 IPR010255 GO:0004601|GO:0006979|GO:0020037
Trme412715g00001 99 Gene3D Peroxidase, domain 2 15 78 - -
Trme412715g00001 99 ProSiteProfiles Plant heme peroxidase family profile. 1 99 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trme412715g00001 99 PANTHER - 16 99 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme412715g00001 20 99 Peroxidase AT2G37130 40.000 3.88e-16 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme412715g00001 K00430 - gmx:100802856 145.976