Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme41242g00001 CAAGAAGAAGCATCCAAAATTGTCCAATTCATCGGCAACCCGAATAACCTTGCAGAAGCCGAATCTTTCCTATACTACATCCTTAAAGCAGTTCCAACATCGTTCAACCATTTGAAAGCAATGCTTTTCAGATCGAATTACGATAGCGAGATTCTTCGGCTTAAGGAACACTTACAAACACTTGACTTGGGTTGCAAGGAACTGAAAACTAGTAGTCTATTCTTGAAACTCCTTGAGGCAATTCTCAAAACTGGTAACAGAATGAATGCTGGAACTTCAAGAGGTAATGCACAAGGTTTCAACTTAAGTGCTCTTACAAAACTTTCTGATGTAAAAAGCACAAATGGAAAAACTAGTTTACTTCACTTCATAGTTGAACAAGTAGTTCATTCAGAAGGGAAAAGAAAAGCTATCTATGAAAAACACAATGATGAAAGTGAAAAAGAATATGTAATTCTTGGTTTACAAGTGCTAAGTGGTCTAAGTAATGAGTTATCAGAAGCAAAAAAAGCAGCTAGCATGCACTATAATAGTTTCATCACTATGTGTTCAACTCTTAGTTCTCATGTTAATGAAATTAGACACATTATAACATGTTGTGGAAACACTAAAGGTGGATTTACCAATGAGATGAAAGGGTTTCTAGAGTTATGTGAGGATGAACTTAAGGTGGTGAAAGAGGAACAAACAAGGATCATGGAACTTGTGAAGAAAACAAATGAGTACTATCTAGCAGGAACATCTAAAGACAATATGTCTAATCCTTTTCATTTGTTTGTTATTGTAAAAGATTTTGTTGACAAGGTTGGTCAAACTTGTATTGAACTAAAAAAGAAGGTAGAAAAGAAGAATGTAGGAATGGAATCTGTATCAACAACACCACCTTTGTCTCCATCAAAGAAGGTGCCACTGAGATTTCGTAGCATTGATTTAAATTTTCTGTCAAATAAGTTAGAGTTAGAGTCTACATTTTCTAGTCAGTCAGAAGATGACTTCTGA 999 0.3504 QEEASKIVQFIGNPNNLAEAESFLYYILKAVPTSFNHLKAMLFRSNYDSEILRLKEHLQTLDLGCKELKTSSLFLKLLEAILKTGNRMNAGTSRGNAQGFNLSALTKLSDVKSTNGKTSLLHFIVEQVVHSEGKRKAIYEKHNDESEKEYVILGLQVLSGLSNELSEAKKAASMHYNSFITMCSTLSSHVNEIRHIITCCGNTKGGFTNEMKGFLELCEDELKVVKEEQTRIMELVKKTNEYYLAGTSKDNMSNPFHLFVIVKDFVDKVGQTCIELKKKVEKKNVGMESVSTTPPLSPSKKVPLRFRSIDLNFLSNKLELESTFSSQSEDDF 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme41242g00001 332 PANTHER FORMIN-RELATED 1 289 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Trme41242g00001 332 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1 295 IPR015425 -
Trme41242g00001 332 SUPERFAMILY Formin homology 2 domain (FH2 domain) 2 288 - -
Trme41242g00001 332 Gene3D Formin, FH2 domain 1 291 IPR042201 -
Trme41242g00001 332 Pfam Formin Homology 2 Domain 1 268 IPR015425 -
Trme41242g00001 332 SMART it6_source 1 284 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme41242g00001 Trme-Chr41242 2 1000 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme41242g00001 1 322 FH2 protein (formin) Gene Family AT1G70140 44.798 2.70e-94 294
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme41242g00001 - - tpra:123885767 639.032