Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme41227g00001 AAGGAGAACTTATGCCTATATGGATATCCAAATGAAACATGGGAAGTGAATTTGCCGGTGGAGGAAGTGCCTCCCGAACTTCCCGAGCCAGCATTAGGCATAAACTTTGCTAGGGATGGGATGCAGGAGAAGGACTGGTTAGCACTGGTTGCAGTTCACAGTGACTCATGGCTGCTTGCTGTTGCTTTTTATTTTGGTGCCCGCTTTGGATTTGTTAGTAATAATGCTCTTTCTACAATCTCCGCCCCCCTTGTTGAGAAAGTTATGGATTATGCTTGA 279 0.4552 KENLCLYGYPNETWEVNLPVEEVPPELPEPALGINFARDGMQEKDWLALVAVHSDSWLLAVAFYFGARFGFVSNNALSTISAPLVEKVMDYA 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme41227g00001 92 PANTHER CPG BINDING PROTEIN 1 75 IPR045104 GO:0006355|GO:0042393
Trme41227g00001 92 Pfam Alfin 1 71 IPR021998 GO:0006355|GO:0042393
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme41227g00001 Trme-Chr41227 124 847 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme41227g00001 1 74 Alfin-like Transcription Factor Family AT2G02470 91.892 1.30e-35 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme41227g00001 K26274 - egr:104420039 134.42